close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4232Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966. (411 aa)    
Predicted Functional Partners:
MXAN_5791
Response regulator/GGDEF domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
 0.973
MXAN_5366
Response regulator/GGDEF domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
 0.971
MXAN_2643
GAF/GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254.
  
 0.951
MXAN_4029
FHA domain/GGDEF domain protein; Identified by match to protein family HMM PF00498; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
 0.951
MXAN_1525
FHA domain/GGDEF domain protein; Identified by match to protein family HMM PF00498; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
 0.929
MXAN_5199
FHA/GGDEF domain protein; Identified by match to protein family HMM PF00498; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
 0.924
MXAN_2997
HAMP domain/GAF domain/GGDEF domain protein; Identified by match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254.
  
 0.874
MXAN_3705
GAF domain/GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254.
  
 0.856
MXAN_3735
Response regulator; Identified by similarity to GB:AAR36766.1; match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
0.800
MXAN_7362
Response regulator/GGDEF domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
 0.781
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.