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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4289Hypothetical protein; Identified by Glimmer2; putative. (496 aa)    
Predicted Functional Partners:
MXAN_3932
Polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00975; match to protein family HMM PF02801.
   
 0.930
MXAN_4291
Conserved hypothetical protein.
  
 
 0.717
MXAN_4290
Putative thioesterase; Identified by match to protein family HMM PF00975.
  
    0.671
gapA
Glyceraldehyde-3-phosphate dehydrogenase 1; Identified by similarity to SP:P09124; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.622
nuoH
Putative NADH dehydrogenase I, H subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
 0.611
MXAN_4288
Hypothetical protein; Identified by Glimmer2; putative.
       0.603
MXAN_6060
Amine oxidase, flavin-containing; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.
  
  
 0.565
MXAN_0202
Amine oxidase, flavin-containing; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.
  
  
 0.564
crtI
Phytoene desaturase; Identified by similarity to SP:Q02861; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734.
  
  
 0.564
MXAN_0897
Hydroxyneurosporene dehydrogenase; Identified by similarity to GB:CAA79958.1; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734.
  
  
 0.564
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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