Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4323Putative lipoprotein. (436 aa)    
Predicted Functional Partners:
MXAN_7328
Peptidase, S8A (subtilisin) subfamily; Identified by similarity to GB:AAC04871.1; match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF05922.
   
  
 0.633
MXAN_3347
HNH endonuclease domain protein.
      
 0.617
MXAN_4073
Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
      
 0.617
celA
Endoglucanase; Identified by similarity to SP:P33682; Belongs to the glycosyl hydrolase family 6.
  
 
 0.584
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
      
 0.538
MXAN_4325
Hypothetical protein; Identified by Glimmer2; putative.
       0.503
MXAN_3564
Peptidase, M36 (fungalysin) family; Identified by similarity to SP:P46075; match to protein family HMM PF02225.
      
 0.496
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.