close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4365Transporter, outer membrane receptor (OMR) family; Identified by similarity to SP:P17315; match to protein family HMM PF00593; match to protein family HMM PF07715. (938 aa)    
Predicted Functional Partners:
MXAN_4364
Identified by match to protein family HMM PF02872.
       0.773
MXAN_6579
Putative TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
  
 0.771
MXAN_4440
Hypothetical protein; Identified by Glimmer2; putative.
  
 
   0.765
MXAN_4363
Hypothetical protein; Identified by Glimmer2; putative.
       0.737
MXAN_6423
Putative membrane protein.
  
     0.731
MXAN_5913
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.724
MXAN_6419
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.717
MXAN_1005
FG-GAP repeat protein; Identified by match to protein family HMM PF01839.
  
 
   0.702
MXAN_5837
Bacterial Ig-like domain (group 1)/fibronectin type III domain protein; Identified by match to protein family HMM PF00041; match to protein family HMM PF02369.
  
 
   0.700
MXAN_3838
PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF03130.
  
     0.697
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.