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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4391Conserved hypothetical protein; Identified by similarity to GB:AAM23984.1. (343 aa)    
Predicted Functional Partners:
kamE
D-lysine 5,6-aminomutase, beta subunit; Identified by similarity to GB:AAC79718.1; match to protein family HMM PF02310.
 
 
 0.979
kamD
D-lysine 5,6-aminomutase, alpha subunit; Identified by similarity to GB:AAC79717.1.
 
 
 0.978
MXAN_4384
Conserved hypothetical protein; Identified by similarity to GB:AAM23981.1; match to protein family HMM PF05853.
 
  
  0.977
MXAN_4385
beta-alanyl-CoA:ammonia lyase; Identified by similarity to GB:CAG29275.1.
 
 
   0.795
MXAN_4699
Putative L-lysine 2,3-aminomutase; Identified by similarity to GB:AAD43134.1; match to protein family HMM PF04055; match to protein family HMM TIGR00238.
 
     0.732
kamA
L-lysine 2,3-aminomutase; Identified by similarity to GB:AAD43134.1; match to protein family HMM PF04055; match to protein family HMM TIGR00238.
 
     0.606
MXAN_4392
Putative esterase; Identified by match to protein family HMM PF00756.
       0.470
MXAN_4393
uracil-DNA glycosylase, family 4; Identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758.
       0.426
MXAN_3779
Non-ribosomal peptide synthetase/polyketide synthase; Identified by similarity to GB:AAF15891.2; match to protein family HMM PF00109; match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801; match to protein family HMM TIGR01733.
  
 
 0.413
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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