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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4452Identified by match to protein family HMM PF03747. (347 aa)    
Predicted Functional Partners:
MXAN_3034
Putative ADP-ribosylglycohydrolase; Identified by match to protein family HMM PF03747.
  
     0.774
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
       0.546
MXAN_4449
Cell wall peptidase, M23 family; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551.
       0.542
surE
Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.542
MXAN_1870
Putative phage terminase, ATPase subunit.
  
     0.451
crm2
CRISPR-associated protein Crm2; Identified by match to protein family HMM TIGR01872; match to protein family HMM TIGR02577.
  
    0.427
MXAN_4448
Hypothetical protein; Identified by Glimmer2; putative.
       0.425
MXAN_1883
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.421
MXAN_4447
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
       0.411
MXAN_5330
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02464.
 
     0.407
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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