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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4495Conserved hypothetical protein; Identified by match to protein family HMM TIGR02241. (151 aa)    
Predicted Functional Partners:
MXAN_4503
Baseplate assembly protein W; Identified by match to protein family HMM PF04965.
 
   0.971
MXAN_4494
Putative Phage tail sheath protein; Identified by match to protein family HMM PF04984.
 
 
 0.969
MXAN_4504
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02243.
 
 
 
 0.969
MXAN_4498
Conserved hypothetical protein.
 
   0.967
MXAN_4496
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.965
MXAN_4500
Conserved domain protein; Identified by similarity to GB:BAB52826.1.
 
 
   0.958
MXAN_4501
Conserved hypothetical protein; Identified by similarity to GB:BAB52827.1; match to protein family HMM PF04524.
 
  
 0.933
MXAN_4497
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02241.
 
    0.930
MXAN_4505
Putative phage tail protein; Identified by match to protein family HMM TIGR02242.
 
     0.918
MXAN_4492
Conserved hypothetical protein; Identified by similarity to GB:AAR34300.1.
 
     0.908
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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