close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4523Putative lipoprotein. (418 aa)    
Predicted Functional Partners:
rsgA
Putative ribosome-associated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
     
  0.900
MXAN_7293
Putative sugar ABC transporter, permease protein; Identified by similarity to GB:AAN33506.1; match to protein family HMM PF00528.
  
 
 0.884
MXAN_5378
Putative sugar ABC transporter, permease protein/periplasmic sugar-binding protein; Identified by similarity to SP:P26467; match to protein family HMM PF00528; match to protein family HMM PF01547.
  
 
 0.852
MXAN_7294
Putative sugar ABC transporter, permease protein; Identified by similarity to PIR:T46751; match to protein family HMM PF00528.
  
 
 0.788
MXAN_5377
Putative sugar ABC transporter, ATP-binding protein; Identified by similarity to GB:AAC04471.1; match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
 
 0.749
MXAN_7225
Putative sugar ABC transporter, ATP-binding protein; Identified by similarity to SP:Q01937; match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily.
  
 
 0.749
MXAN_4522
Hypothetical protein; Identified by Glimmer2; putative.
       0.718
MXAN_5503
Polar amino acid transport system substrate-binding protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  
  
 0.433
birA
BirA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.405
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.