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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4563Hypothetical protein; Identified by Glimmer2; putative. (405 aa)    
Predicted Functional Partners:
MXAN_1115
SREBP protease/CBS domain; Identified by match to protein family HMM PF00571; match to protein family HMM PF02163.
 
     0.782
MXAN_4562
HAMP domain protein; Identified by match to protein family HMM PF00672; match to protein family HMM PF07228.
       0.538
MXAN_4564
2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit; Identified by similarity to SP:P37940; match to protein family HMM PF00676.
       0.497
MXAN_4565
2-oxoisovalerate dehydrogenase complex, E1 component, beta subunit; Identified by similarity to SP:P37941; match to protein family HMM PF02779; match to protein family HMM PF02780.
       0.497
MXAN_4560
Hypothetical protein; Identified by Glimmer2; putative.
       0.480
MXAN_4561
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
       0.480
MXAN_4558
Hypothetical protein; Identified by Glimmer2; putative.
       0.452
MXAN_4557
Identified by similarity to SP:P54738; match to protein family HMM PF00069.
  
    0.447
MXAN_4559
Putative tonB dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
       0.445
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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