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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4587Conserved hypothetical protein. (1022 aa)    
Predicted Functional Partners:
MXAN_6958
Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.
  
    0.737
MXAN_1742
Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.
  
     0.711
MXAN_4798
Conserved domain protein.
  
     0.701
MXAN_2297
Conserved hypothetical protein; Identified by similarity to PIR:AH2368.
  
     0.657
MXAN_5837
Bacterial Ig-like domain (group 1)/fibronectin type III domain protein; Identified by match to protein family HMM PF00041; match to protein family HMM PF02369.
  
     0.655
MXAN_1735
Putative lipoprotein; Identified by match to protein family HMM PF00058.
  
     0.650
MXAN_4014
BNR/Asp-box repeat domain protein.
  
     0.636
MXAN_1323
Putative membrane protein; Identified by similarity to GB:AAU27061.1.
  
     0.626
MXAN_4308
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.623
MXAN_1599
Putative methyltransferase; Identified by match to protein family HMM PF00891.
  
     0.607
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.