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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pkn1-2Serine/threonine-protein kinase PKN1; Identified by similarity to SP:P33973. (552 aa)    
Predicted Functional Partners:
MXAN_4398
Protein phosphatase/cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00481.
 
 0.807
pph1
Protein phosphatase 1; Identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481.
 
 
 0.806
MXAN_5349
Serine/threonine protein phosphatase, 2C family; Identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481.
 
 0.802
MXAN_1412
Putative serine/threonine protein phosphatase; Identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481.
 
 
 0.794
MXAN_4589
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.485
MXAN_4590
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.478
pkn9
Serine/threonine protein kinase Pkn9; Identified by similarity to GB:AAD42859.1; match to protein family HMM PF00069.
  
   
0.471
pkn2
Serine/threonine protein kinase Pkn2; Identified by similarity to SP:P54736; match to protein family HMM PF00069; match to protein family HMM PF00211.
  
   
0.466
pkn13
Serine/threonine kinase PKN13; Identified by similarity to SP:P54738; match to protein family HMM PF00069.
  
   
0.447
pkn8
Serine/threonine kinase PKN8; Identified by similarity to SP:P33973; match to protein family HMM PF00069; match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
  
  
0.441
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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