close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4630Identified by match to protein family HMM PF01694. (217 aa)    
Predicted Functional Partners:
MXAN_4631
Conserved hypothetical protein TIGR00730; Identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; Belongs to the LOG family.
  
    0.788
MXAN_5590
Peptidase, S54 (rhomboid) family; Identified by match to protein family HMM PF01694.
  
     0.760
MXAN_2978
5,10-methenyltetrahydrofolate synthetase; Identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.545
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.540
MXAN_5905
Putative twin-arginine translocation protein TatB; Identified by match to protein family HMM PF02416.
   
 
 0.493
tatA
Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.492
MXAN_2587
Conserved hypothetical protein; Identified by similarity to GB:AAQ57912.1.
  
  
 0.477
MXAN_2808
OB-fold nucleic acid binding domain protein; Identified by match to protein family HMM PF01336.
  
     0.459
MXAN_4627
TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF01987.
  
    0.417
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (32%) [HD]