Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MXAN_4635Conserved hypothetical protein; Identified by similarity to GB:AAM39803.1; match to protein family HMM PF04519. (240 aa)    
Predicted Functional Partners:
MXAN_4637
Conserved hypothetical protein; Identified by similarity to GB:AAM24097.1; match to protein family HMM PF04519.
 
   
0.844
MXAN_4636
Conserved hypothetical protein; Identified by similarity to GB:AAS69674.1; match to protein family HMM PF04519.
 
   
0.831
ccmA
Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
      
 0.746
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.719
mreB-2
Rod shape-determining protein MreB; Identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904.
 
   
 0.692
MXAN_4632
Putative lipoprotein.
       0.688
MXAN_4634
ParB-like nuclease domain protein; Identified by match to protein family HMM PF02195.
       0.685
agmH
Lysophospholipase AgmH; Identified by similarity to GB:AAO22882.1; match to protein family HMM PF00561.
       0.618
MXAN_4639
TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
       0.593
MXAN_4640
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF02518.
       0.495
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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