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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4649FHA domain protein; Identified by match to protein family HMM PF00498. (484 aa)    
Predicted Functional Partners:
MXAN_4650
Type II secretion system protein F domain protein; Identified by match to protein family HMM PF00482.
 
    0.813
MXAN_4651
Type II secretion system protein F domain protein; Identified by match to protein family HMM PF00482.
 
     0.802
MXAN_4648
FHA domain protein; Identified by match to protein family HMM PF00498.
 
   
0.784
MXAN_3104
FHA domain protein; Identified by match to protein family HMM PF00498.
  
     0.683
MXAN_4652
Putative Flp pilus assembly protein CpaB; Identified by match to protein family HMM PF06981.
  
    0.646
MXAN_3693
Serine/threonine protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF07719.
 
   0.509
MXAN_0265
Serine/threonine protein kinase; Identified by match to protein family HMM PF00069.
  
 
   0.501
MXAN_3988
FHA domain protein; Identified by match to protein family HMM PF00498.
  
    0.480
MXAN_2586
Serine/threonine protein kinase; Identified by match to protein family HMM PF00069.
  
 
   0.477
MXAN_4557
Identified by similarity to SP:P54738; match to protein family HMM PF00069.
  
 
   0.464
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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