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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4650Type II secretion system protein F domain protein; Identified by match to protein family HMM PF00482. (296 aa)    
Predicted Functional Partners:
MXAN_4652
Putative Flp pilus assembly protein CpaB; Identified by match to protein family HMM PF06981.
 
  
 0.976
MXAN_4651
Type II secretion system protein F domain protein; Identified by match to protein family HMM PF00482.
 
   
 0.958
MXAN_3107
Type II/IV secretion system protein; Identified by match to protein family HMM PF00437; match to protein family HMM PF00498.
 
  
 0.922
MXAN_0759
Type II/IV secretion system ATPase, TadA family; Identified by similarity to GB:AAF40195.1; match to protein family HMM PF00437.
 
  
 0.921
MXAN_3106
Protein transporter, outer bacterial membrane secretin (secretin) family; Identified by match to protein family HMM PF00263; Belongs to the bacterial secretin family.
 
  
 0.872
MXAN_4649
FHA domain protein; Identified by match to protein family HMM PF00498.
 
    0.813
MXAN_2045
Conserved hypothetical protein; Identified by similarity to GB:CAE78452.1; match to protein family HMM PF02643.
 
     0.802
MXAN_3976
Conserved hypothetical protein.
 
    0.784
MXAN_2986
Conserved hypothetical protein.
 
    0.782
MXAN_3105
Type IV leader peptidase family protein; Identified by match to protein family HMM PF01478.
 
   
 0.781
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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