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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4653Putative lipoprotein. (243 aa)    
Predicted Functional Partners:
MXAN_4654
Hypothetical protein; Identified by Glimmer2; putative.
       0.508
MXAN_4655
Hypothetical protein; Identified by Glimmer2; putative.
       0.508
MXAN_4656
Hypothetical protein; Identified by Glimmer2; putative.
       0.508
MXAN_4657
Hypothetical protein; Identified by Glimmer2; putative.
       0.508
MXAN_4658
Pilus biogenesis protein, TadE family; Identified by match to protein family HMM PF07811.
       0.508
MXAN_4659
Hypothetical protein; Identified by Glimmer2; putative.
       0.508
MXAN_4660
Pilus biogenesis protein, TadE family; Identified by match to protein family HMM PF07811.
       0.473
MXAN_4652
Putative Flp pilus assembly protein CpaB; Identified by match to protein family HMM PF06981.
  
    0.446
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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