STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_47483-hydroxyisobutyrate dehydrogenase family protein; Identified by similarity to SP:O34969. (296 aa)    
Predicted Functional Partners:
MXAN_4749
Putative ABC transporter, permease protein.
       0.538
MXAN_4750
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.521
cheY
Chemotaxis protein CheY; Identified by similarity to SP:P71403; match to protein family HMM PF00072.
       0.498
MXAN_2698
Identified by match to protein family HMM PF00378.
 
  
 0.492
cheR-2
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
  
    0.438
cheB
Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
       0.424
MXAN_4754
PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.
       0.424
MXAN_4755
Hypothetical protein; Identified by Glimmer2; putative.
       0.424
MXAN_6728
Oxidoreductase, zinc-binding dehydrogenase family; Identified by match to protein family HMM PF00107.
  
     0.423
MXAN_2240
Oxidoreductase, zinc-binding dehydrogenase family; Identified by match to protein family HMM PF00107.
  
     0.405
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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