MXAN_4803 protein (Myxococcus xanthus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MXAN_4803

Conserved hypothetical protein; Identified by similarity to GB:AAN68700.1. (238 aa)

Predicted Functional Partners:

MXAN_0113

0.991

MXAN_4801

0.981

MXAN_4802

0.979

MXAN_4804

0.976

MXAN_4808

0.970

MXAN_4807

0.966

MXAN_4806

0.964

MXAN_4811

0.946

MXAN_4810

0.937

MXAN_4800

0.933

Your Current Organism:

Myxococcus xanthus

NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
MXAN_0113	MXAN_4800	Hypothetical protein; Identified by Glimmer2; putative.	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	0.953
MXAN_0113	MXAN_4801	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by similarity to GB:AAO58843.1.	0.958
MXAN_0113	MXAN_4802	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by match to protein family HMM PF05936.	0.971
MXAN_0113	MXAN_4803	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by similarity to GB:AAN68700.1.	0.991
MXAN_0113	MXAN_4804	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by similarity to PIR:G83637.	0.943
MXAN_0113	MXAN_4806	Hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.959
MXAN_0113	MXAN_4807	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by similarity to PIR:F82498; match to protein family HMM PF05591.	0.965
MXAN_0113	MXAN_4808	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by similarity to GB:AAR36564.1; match to protein family HMM PF05943.	0.897
MXAN_0113	MXAN_4810	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by similarity to GB:CAE12665.1; match to protein family HMM PF07025.	0.964
MXAN_0113	MXAN_4811	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by similarity to GB:AAR33763.1; match to protein family HMM PF05947.	0.979
MXAN_4800	MXAN_0113	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	Hypothetical protein; Identified by Glimmer2; putative.	0.953
MXAN_4800	MXAN_4801	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	Conserved hypothetical protein; Identified by similarity to GB:AAO58843.1.	0.901
MXAN_4800	MXAN_4802	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	Conserved hypothetical protein; Identified by match to protein family HMM PF05936.	0.909
MXAN_4800	MXAN_4803	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	Conserved hypothetical protein; Identified by similarity to GB:AAN68700.1.	0.933
MXAN_4800	MXAN_4804	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	Conserved hypothetical protein; Identified by similarity to PIR:G83637.	0.897
MXAN_4800	MXAN_4806	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	Hypothetical protein; Identified by Glimmer2; putative.	0.915
MXAN_4800	MXAN_4807	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	Conserved hypothetical protein; Identified by similarity to PIR:F82498; match to protein family HMM PF05591.	0.935
MXAN_4800	MXAN_4808	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	Conserved hypothetical protein; Identified by similarity to GB:AAR36564.1; match to protein family HMM PF05943.	0.904
MXAN_4800	MXAN_4810	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	Conserved hypothetical protein; Identified by similarity to GB:CAE12665.1; match to protein family HMM PF07025.	0.885
MXAN_4800	MXAN_4811	Rhs element Vgr family protein; Identified by match to protein family HMM PF04524; match to protein family HMM PF06715; match to protein family HMM TIGR01646.	Conserved hypothetical protein; Identified by similarity to GB:AAR33763.1; match to protein family HMM PF05947.	0.868