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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4817Glycosyl hydrolase, family 16; Identified by match to protein family HMM PF00722. (455 aa)    
Predicted Functional Partners:
MXAN_2927
Glycosyl hydrolase, family 18; Identified by match to protein family HMM PF00704; match to protein family HMM PF02839; Belongs to the glycosyl hydrolase 18 family.
  
    0.612
MXAN_4534
Chitinase, class I; Identified by match to protein family HMM PF00182; match to protein family HMM PF00652.
  
    0.603
MXAN_1630
Putative chitinase; Identified by similarity to GB:AAP04616.1; match to protein family HMM PF00704; Belongs to the glycosyl hydrolase 18 family.
  
    0.565
MXAN_2288
Glycosyl hydrolase, family 18; Identified by match to protein family HMM PF00041; match to protein family HMM PF00704; Belongs to the glycosyl hydrolase 18 family.
  
    0.554
cysA
Sulfate ABC transporter, ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
  
    0.550
MXAN_6008
Chitinase, class II; Identified by similarity to GB:AAK69033.1; match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839.
 
   
 0.544
cysW
Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140.
       0.538
MXAN_2353
Putative oligopeptide transporter; Identified by match to protein family HMM PF03169.
  
     0.503
MXAN_4279
Putative helicase; Identified by match to protein family HMM PF00271.
  
     0.493
cysT
Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.487
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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