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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iorA-2Isoquinoline 1-oxidoreductase, alpha subunit; Identified by similarity to SP:Q51697; match to protein family HMM PF00111; match to protein family HMM PF01799. (153 aa)    
Predicted Functional Partners:
iorB-2
Isoquinoline 1-oxidoreductase, beta subunit; Identified by similarity to SP:Q51698; match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR01409.
 
 0.996
iorB
Isoquinoline 1-oxidoreductase, beta subunit; Identified by similarity to SP:Q51698; match to protein family HMM PF02738.
 
 0.980
MXAN_6109
Identified by match to protein family HMM PF02625.
 
  
 0.843
MXAN_3144
Putative xanthine dehydrogenase accessory factor; Identified by similarity to GB:CAB41849.1; match to protein family HMM PF02625.
 
  
 0.830
MXAN_4831
Putative lipoprotein.
 
     0.822
MXAN_6110
Conserved hypothetical protein; Identified by similarity to GB:AAM37733.1.
 
  
 0.796
MXAN_6054
Conserved domain protein; Identified by similarity to GB:AAN69542.1.
  
 
 0.795
MXAN_7035
Conserved hypothetical protein.
 
  
 0.685
clpC
ATP-dependent Clp protease, ATP-binding subunit ClpC; Identified by similarity to GB:AAC44446.1; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; Belongs to the ClpA/ClpB family.
       0.625
MXAN_4833
Hypothetical protein; Identified by Glimmer2; putative.
       0.427
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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