Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4878ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (240 aa)    
Predicted Functional Partners:
MXAN_4879
Putative ABC transporter, permease protein; Identified by similarity to PIR:AF2008.
 
 
 0.955
MXAN_4880
Conserved hypothetical protein.
 
   
 0.929
MXAN_6402
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    
0.910
MXAN_1548
Putative membrane spanning protein.
 
 0.871
MXAN_6661
Putative branched-chain amino acid ABC transporter, ATP-binding protein; Identified by similarity to GB:AAR36781.1; match to protein family HMM PF00005.
 
     
0.871
MXAN_4881
Putative lipoprotein.
 
     0.758
MXAN_1549
Putative membrane protein.
 
   
 0.681
MXAN_4877
Aspartate kinase; Identified by similarity to SP:P26512; match to protein family HMM PF00696; match to protein family HMM TIGR00657; Belongs to the aspartokinase family.
       0.527
pilI
Putative efflux ABC transporter, permease protein PilI; Identified by similarity to GB:AAC36156.1.
 
 
 0.468
MXAN_4876
Putative lipoprotein; Identified by match to protein family HMM PF01436.
  
    0.441
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.