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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4893Hypothetical protein; Identified by Glimmer2; putative. (201 aa)    
Predicted Functional Partners:
MXAN_4892
Hypothetical protein; Identified by Glimmer2; putative.
       0.808
MXAN_4891
Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family.
       0.651
MXAN_3377
FHA/TonB domain protein; Identified by match to protein family HMM PF00498; match to protein family HMM TIGR01352.
  
     0.647
MXAN_3709
HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase; Identified by similarity to GB:AAC48784.1; match to protein family HMM PF05761; match to protein family HMM TIGR02244.
  
     0.597
MXAN_4046
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.595
MXAN_0587
Trypsin domain protein; Belongs to the peptidase S1B family.
  
     0.540
MXAN_5011
Peptidase, S1 (chymotrypsin) family; Identified by match to protein family HMM PF00089; Belongs to the peptidase S1B family.
  
     0.526
MXAN_6352
Conserved domain protein; Identified by similarity to GB:CAE80420.1; match to protein family HMM PF04151; Belongs to the peptidase S1B family.
  
     0.506
MXAN_2308
Conserved hypothetical protein.
  
     0.465
MXAN_3210
Penicillin-binding protein transpeptidase domain protein; Identified by match to protein family HMM PF00905.
  
    0.443
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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