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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_4995DTW domain protein; Identified by match to protein family HMM PF03942. (194 aa)    
Predicted Functional Partners:
MXAN_4993
Putative membrane protein; Identified by similarity to SP:O28720; match to protein family HMM PF00892.
       0.773
MXAN_4994
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_4992
Putative transcriptional regulator; Identified by match to protein family HMM PF08220.
       0.678
MXAN_2143
Conserved hypothetical protein; Identified by similarity to PIR:A83002.
  
     0.513
MXAN_6338
Identified by match to protein family HMM PF01253.
  
    0.510
MXAN_4991
Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
       0.487
MXAN_3709
HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase; Identified by similarity to GB:AAC48784.1; match to protein family HMM PF05761; match to protein family HMM TIGR02244.
  
     0.448
MXAN_5683
Putative lipoprotein.
  
     0.443
MXAN_4990
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
       0.425
MXAN_5684
Putative lipoprotein; Identified by match to protein family HMM TIGR02722.
  
     0.415
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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