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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5022Conserved hypothetical protein; Identified by similarity to GB:AAM31652.1. (128 aa)    
Predicted Functional Partners:
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
       0.505
MXAN_5017
Putative phosphomevalonate kinase; Identified by similarity to GB:BAB07792.1; match to protein family HMM PF00288.
       0.444
mvaD
Diphosphomevalonate decarboxylase; Identified by match to protein family HMM PF00288; match to protein family HMM TIGR01240.
       0.444
mvk
Mevalonate kinase; Identified by similarity to GB:AAG02440.1; match to protein family HMM PF00288; match to protein family HMM TIGR00549.
       0.444
MXAN_5020
hydroxymethylglutaryl-CoA reductase; Identified by match to protein family HMM PF00368; match to protein family HMM TIGR00532; Belongs to the HMG-CoA reductase family.
       0.444
MXAN_3207
Conserved hypothetical protein; Identified by similarity to GB:AAU19568.1; match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
  
  
 0.405
MXAN_4068
Conserved hypothetical protein, UPF0033 family; Identified by match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
  
  
 0.405
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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