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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5044Putative cell wall surface anchor family protein. (239 aa)    
Predicted Functional Partners:
MXAN_5043
Putative lipoprotein; Identified by match to protein family HMM TIGR02232.
    
0.933
MXAN_0411
Hypothetical protein; Identified by Glimmer2; putative.
 
 
   0.694
MXAN_1735
Putative lipoprotein; Identified by match to protein family HMM PF00058.
  
 
   0.663
MXAN_5042
OmpA domain protein; Identified by match to protein family HMM PF00691; match to protein family HMM PF02412.
 
    0.659
MXAN_6270
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.559
MXAN_3195
ATPase, AAA family; Identified by match to protein family HMM PF07728.
  
    0.532
MXAN_0262
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.501
MXAN_1420
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.501
MXAN_5045
Identified by similarity to GB:AAD42859.1; match to protein family HMM PF00069; match to protein family HMM PF00515.
       0.499
MXAN_6615
Conserved hypothetical protein.
  
    0.499
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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