STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5217Identified by match to protein family HMM PF03098. (664 aa)    
Predicted Functional Partners:
MXAN_1744
Identified by match to protein family HMM PF00305; match to protein family HMM PF01477.
  
  
 0.837
MXAN_1644
Putative epoxide hydrolase; Identified by similarity to GB:CAA55294.1; match to protein family HMM PF00561.
 
  
 0.835
MXAN_1745
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.803
MXAN_5137
Peptidase, M1 (aminopeptidase N) family; Identified by similarity to SP:P24527; match to protein family HMM PF01433.
      
 0.803
MXAN_2754
Peptidase, M4 (thermolysin) family; Identified by similarity to SP:P05806; similarity to GB:AAB62279.1; match to protein family HMM PF01447; match to protein family HMM PF01483; match to protein family HMM PF02868; match to protein family HMM PF03413; match to protein family HMM PF07504.
  
  
 0.717
MXAN_1789
ABC transporter, ATP-binding protein/peptidase, C39 family; Identified by match to protein family HMM PF00005; match to protein family HMM PF03412.
  
  
 0.660
MXAN_2853
Putative lantibiotic ABC transporter, permease/ATP-binding protein; Identified by similarity to SP:P22520; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412.
  
  
 0.660
MXAN_0683
Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
     
 0.640
MXAN_2304
Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
     
 0.640
MXAN_3884
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.572
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.