cspB protein (Myxococcus xanthus) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

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textmining

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Score

cspB

Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313. (66 aa)

Predicted Functional Partners:

MXAN_3463

0.522

rpsL

0.489

rpmE

0.479

rpmJ

0.463

rpsQ

0.454

rpsE

0.450

rplO

0.449

MXAN_5309

0.449

rpsT

0.437

MXAN_2485

0.436

Your Current Organism:

Myxococcus xanthus

NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MXAN_2485	cspB	MXAN_2485	MXAN_5310	Type II DNA topoisomerase, A subunit; Identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01061; match to protein family HMM TIGR01062; match to protein family HMM TIGR01063.	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	0.436
MXAN_2485	rpmJ	MXAN_2485	MXAN_3322	Type II DNA topoisomerase, A subunit; Identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01061; match to protein family HMM TIGR01062; match to protein family HMM TIGR01063.	Ribosomal protein L36; Identified by similarity to SP:P21194; match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family.	0.434
MXAN_2485	rpsL	MXAN_2485	MXAN_3295	Type II DNA topoisomerase, A subunit; Identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01061; match to protein family HMM TIGR01062; match to protein family HMM TIGR01063.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.423
MXAN_3463	cspB	MXAN_3463	MXAN_5310	Fatty acid desaturase; Identified by match to protein family HMM PF00487.	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	0.522
MXAN_5309	cspB	MXAN_5309	MXAN_5310	Conserved hypothetical protein; Identified by similarity to PIR:AG1918; match to protein family HMM PF07883.	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	0.449
cspB	MXAN_2485	MXAN_5310	MXAN_2485	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	Type II DNA topoisomerase, A subunit; Identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01061; match to protein family HMM TIGR01062; match to protein family HMM TIGR01063.	0.436
cspB	MXAN_3463	MXAN_5310	MXAN_3463	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	Fatty acid desaturase; Identified by match to protein family HMM PF00487.	0.522
cspB	MXAN_5309	MXAN_5310	MXAN_5309	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	Conserved hypothetical protein; Identified by similarity to PIR:AG1918; match to protein family HMM PF07883.	0.449
cspB	rplO	MXAN_5310	MXAN_3318	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.449
cspB	rpmE	MXAN_5310	MXAN_5139	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	Ribosomal protein L31; Binds the 23S rRNA.	0.479
cspB	rpmJ	MXAN_5310	MXAN_3322	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	Ribosomal protein L36; Identified by similarity to SP:P21194; match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family.	0.463
cspB	rpsE	MXAN_5310	MXAN_3316	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.450
cspB	rpsL	MXAN_5310	MXAN_3295	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.489
cspB	rpsQ	MXAN_5310	MXAN_3308	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.454
cspB	rpsT	MXAN_5310	MXAN_4742	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.437
rplO	cspB	MXAN_3318	MXAN_5310	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	Cold-shock protein CspB; Identified by similarity to GB:AAD10034.1; match to protein family HMM PF00313.	0.449
rplO	rpmE	MXAN_3318	MXAN_5139	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	Ribosomal protein L31; Binds the 23S rRNA.	0.939
rplO	rpmJ	MXAN_3318	MXAN_3322	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	Ribosomal protein L36; Identified by similarity to SP:P21194; match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family.	0.989
rplO	rpsE	MXAN_3318	MXAN_3316	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.997
rplO	rpsL	MXAN_3318	MXAN_3295	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.990