STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5497General secretion pathway protein E, N-terminal domain protein; Identified by match to protein family HMM PF05157. (293 aa)    
Predicted Functional Partners:
pilC
Type 4 fimbrial assembly protein PilC; Identified by similarity to GB:AAA25733.1; similarity to GB:AAT00616.1; match to protein family HMM PF00482.
 
  
 0.798
MXAN_1090
General secretory system II protein E, N-terminal domain protein; Identified by match to protein family HMM PF05157.
  
     0.774
MXAN_4666
General secretion pathway protein E, N-terminal domain protein; Identified by match to protein family HMM PF05157.
  
     0.773
MXAN_4436
General secretory system II protein E, N-terminal domain protein; Identified by match to protein family HMM PF05157.
  
     0.768
MXAN_2924
General secretory system II protein E, N-terminal domain protein; Identified by match to protein family HMM PF05157.
  
     0.746
gspF
General secretion pathway protein F; Identified by similarity to GB:AAD05175.1; match to protein family HMM PF00482; match to protein family HMM TIGR02120.
 
  
 0.738
frgA
FrgA protein; Identified by similarity to GB:AAF18101.1; match to protein family HMM PF05157.
  
     0.675
gspO
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.616
pilT-3
Twitching motility protein PilT; Identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420.
 
  
 0.596
pilT-2
Twitching mobility protein; Identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420.
 
  
 0.587
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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