STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5556Oxidoredutase membrane subunit, NrfD family; Identified by match to protein family HMM PF03916. (492 aa)    
Predicted Functional Partners:
MXAN_5557
Putative iron-sulfur binding oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF04879; match to protein family HMM TIGR01409.
 
 
 0.998
MXAN_3875
Oxidoreductase, iron-sulfur binding subunit; Identified by match to protein family HMM PF00037.
 
 
 0.995
MXAN_6079
Putative molybdopterin oxidoreductase, iron-sulfur binding subunit; Identified by similarity to SP:O29751; match to protein family HMM PF00037.
 
 
 0.995
MXAN_5555
Conserved hypothetical protein; Identified by similarity to GB:AAS69490.1.
 
 
 0.979
MXAN_5558
Putative cytochrome c.
 
 
 
 0.969
MXAN_5554
Cytochrome c family protein.
 
 
 
 0.958
MXAN_6081
Conserved hypothetical protein.
 
 
 0.903
MXAN_5553
Putative membrane protein; Identified by similarity to GB:CAE79489.1.
 
 
0.889
MXAN_6078
Putative cytochrome c.
 
 
 
 0.880
MXAN_3876
Putative cytochrome c.
 
 
 
 0.878
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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