STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5617Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. (117 aa)    
Predicted Functional Partners:
MXAN_5618
Aha1 domain protein.
    0.955
MXAN_6276
Conserved hypothetical protein; Identified by similarity to GB:BAC89377.1.
 
    0.786
MXAN_4607
Conserved hypothetical protein; Identified by similarity to GB:CAE31434.1.
 
    0.550
MXAN_5619
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.515
MXAN_7502
Conserved hypothetical protein; Identified by similarity to GB:BAB49428.1.
 
    0.478
MXAN_5616
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
       0.432
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.