STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5679Putative heme oxygenase; Identified by match to protein family HMM PF01126. (246 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.927
cumA
Multicopper oxidase; Identified by similarity to GB:AAD24211.1; match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732.
    
 0.912
MXAN_2878
Putative bacterioferritin; Identified by match to protein family HMM PF00210; match to protein family HMM PF02915.
     
 0.905
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
 0.902
MXAN_6143
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.731
MXAN_6835
Putative deoxyribonuclease I-like protein; Identified by similarity to GB:BAA88714.1; match to protein family HMM PF03372.
 
     0.723
MXAN_1744
Identified by match to protein family HMM PF00305; match to protein family HMM PF01477.
  
     0.712
MXAN_6411
Putative protein-arginine deiminase; Identified by match to protein family HMM PF03068.
  
     0.643
MXAN_2459
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
  
 0.629
MXAN_0209
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.627
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (24%) [HD]