STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5800Bacterial pre-peptidase C-terminal domain protein; Identified by match to protein family HMM PF01833; match to protein family HMM PF04151. (1016 aa)    
Predicted Functional Partners:
MXAN_5799
Rhs family protein; Identified by match to protein family HMM PF01344; match to protein family HMM PF05593; match to protein family HMM PF07646; match to protein family HMM TIGR01643.
     0.944
MXAN_5801
Di-haem cytochrome-c peroxidase; Identified by match to protein family HMM PF03150.
 
  
 0.705
MXAN_1237
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.481
MXAN_5970
Peptidase, S8 (subtilisin) family; Identified by similarity to GB:BAB21265.1.
  
     0.455
MXAN_6334
Conserved domain protein; Identified by similarity to PIR:B82414; Belongs to the peptidase S1B family.
  
     0.428
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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