STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_5828SpoVR-like protein; Identified by similarity to SP:P37875; match to protein family HMM PF04293. (497 aa)    
Predicted Functional Partners:
MXAN_5827
Conserved hypothetical protein; Identified by match to protein family HMM PF04285; Belongs to the UPF0229 family.
 
  
 0.989
prkA
PrkA protein; Identified by similarity to PIR:JC4602.
 
  
 0.979
MXAN_4046
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.949
MXAN_1074
Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.562
otsAB
Alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase; Identified by match to protein family HMM PF00982; match to protein family HMM PF02358; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484.
   
    0.562
MXAN_3188
Identified by match to protein family HMM PF02562.
   
    0.516
MXAN_5829
M23 peptidase metal-binding motif and HXH active site are conserved; identified by match to protein family HMM PF01551.
       0.472
MXAN_2660
Putative lipoprotein.
   
    0.457
MXAN_2870
Identified by match to protein family HMM PF03372; match to protein family HMM PF05345.
   
    0.457
MXAN_4542
Identified by match to protein family HMM PF03372.
   
    0.457
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.