STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6032Putative response regulator/chemotaxis protein CheW; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584. (288 aa)    
Predicted Functional Partners:
MXAN_6029
Chemotaxis sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518.
 
 
0.982
MXAN_2445
Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.
  
  
 0.971
MXAN_5649
Type III secretion system apparatus protein YscQ/HrcQ; Identified by match to protein family HMM PF01052; match to protein family HMM TIGR02551.
  
  
 0.971
MXAN_6033
Putative chemotaxis protein CheY; Identified by match to protein family HMM PF00072.
 
  
 0.944
cheA3
Sensor histidine kinase/response regulator CheA3; Identified by similarity to GB:AAL46994.1; match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518.
 
 
 0.939
MXAN_4465
Sensor histidine kinase/response rgulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 
 0.938
MXAN_6855
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF05231; match to protein family HMM TIGR00229.
 
 
 0.938
MXAN_0195
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
 
 0.933
MXAN_6735
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.
  
 
0.928
MXAN_6951
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518.
 
 
0.926
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.