STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6449B12 binding/radical SAM domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF04055. (427 aa)    
Predicted Functional Partners:
MXAN_5879
Sigma-54 dependent transcriptional regulator, Fis family; Identified by match to protein family HMM PF00158; match to protein family HMM PF02830; match to protein family HMM PF02954; match to protein family HMM PF06505; match to protein family HMM TIGR01199.
  
  
 0.662
MXAN_6446
Hypothetical protein; Identified by Glimmer2; putative.
       0.623
MXAN_6447
Hypothetical protein; Identified by Glimmer2; putative.
       0.623
MXAN_6448
Putative lipoprotein; Identified by match to protein family HMM TIGR02269.
       0.623
MXAN_5472
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.555
MXAN_6755
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.555
MXAN_6450
Beta-lactamase; Identified by match to protein family HMM PF00144.
       0.553
MXAN_2119
Polyphosphate kinase 2, internal deletion; Identified by similarity to GB:AAN87337.1; match to protein family HMM PF03976.
   
    0.505
MXAN_2651
Conserved hypothetical protein; Identified by similarity to GB:AAT30935.1; match to protein family HMM PF03976.
   
    0.505
ccoNO
Cytochrome c oxidase, cbb3-type, subunit I/II; Identified by match to protein family HMM PF00115; match to protein family HMM PF02433; match to protein family HMM TIGR00780; match to protein family HMM TIGR00781; Belongs to the heme-copper respiratory oxidase family.
   
  
 0.497
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.