STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6458Identified by match to protein family HMM PF00597. (206 aa)    
Predicted Functional Partners:
MXAN_6457
Putative lipoprotein.
       0.578
MXAN_6459
Radical SAM domain protein; Identified by match to protein family HMM PF04055; Belongs to the radical SAM superfamily. RlmN family.
       0.516
MXAN_6460
Conserved domain protein; Identified by similarity to GB:BAC12185.1.
       0.508
MXAN_0324
Identified by match to protein family HMM PF00597.
  
     0.497
MXAN_0609
Identified by match to protein family HMM PF01569.
 
   
 0.492
MXAN_6462
DNA-3-methyladenine glycosylase; Identified by match to protein family HMM PF02245; match to protein family HMM TIGR00567; Belongs to the DNA glycosylase MPG family.
  
  
 0.480
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.