STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6557Putative lipoprotein. (194 aa)    
Predicted Functional Partners:
MXAN_6549
Transcriptional regulator, ROK family; Identified by similarity to SP:P15301; similarity to SP:P16557; match to protein family HMM PF00480.
       0.781
MXAN_6552
Putative oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to PIR:G82301; match to protein family HMM PF00528.
  
    0.774
MXAN_6550
Glycosyl hydrolase, family 15; Identified by match to protein family HMM PF00722.
       0.773
MXAN_6551
Putative oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein; Identified by match to protein family HMM PF00496.
       0.773
MXAN_6553
Putative oligopeptide/dipeptide ABC transporter, permease/ATP-binding protein; Identified by similarity to SP:P26905; match to protein family HMM PF00005; match to protein family HMM PF00528.
       0.773
MXAN_6554
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
       0.773
MXAN_6555
Beta-glucosidase; Identified by similarity to SP:P10482; match to protein family HMM PF00232.
       0.773
MXAN_6556
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_6558
Putative lipoprotein.
       0.773
MXAN_6548
Conserved domain protein; Identified by similarity to GB:AAP09047.1.
       0.639
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.