STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6585Conserved hypothetical protein. (395 aa)    
Predicted Functional Partners:
MXAN_6586
Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
     0.785
MXAN_6961
PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.
  
     0.685
MXAN_6735
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518.
  
  
 0.636
MXAN_6584
NHL repeat protein.
       0.569
MXAN_4539
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.529
glp
Glycerol 3-phosphate permease; Identified by similarity to SP:P37948; match to protein family HMM PF07690.
  
     0.509
MXAN_0733
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
  
  
 0.500
MXAN_4257
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254.
 
  
 0.487
MXAN_6587
Hypothetical protein; Identified by Glimmer2; putative.
       0.486
MXAN_6588
Competence protein comEA; Identified by match to protein family HMM PF00633.
       0.486
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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