STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6725PDZ domain protein; Identified by match to protein family HMM PF00595. (949 aa)    
Predicted Functional Partners:
MXAN_1365
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.774
agmK
Adventurous gliding motility protein AgmK; Identified by similarity to GB:AAO22907.1; match to protein family HMM PF00515; match to protein family HMM PF07719.
  
 
   0.760
MXAN_2297
Conserved hypothetical protein; Identified by similarity to PIR:AH2368.
  
     0.758
MXAN_2936
Putative lipoprotein.
  
   0.750
MXAN_2933
Putative lipoprotein.
  
   0.744
MXAN_2932
Putative lipoprotein.
  
   0.740
MXAN_3168
DnaJ domain protein; Identified by match to protein family HMM PF00226.
  
     0.737
MXAN_3046
Putative lipoprotein.
  
   0.732
MXAN_4014
BNR/Asp-box repeat domain protein.
  
   0.730
MXAN_2429
ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
 
   0.729
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.