STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6818Hypothetical protein; Identified by Glimmer2; putative. (506 aa)    
Predicted Functional Partners:
MXAN_2492
Conserved domain protein; Identified by similarity to PIR:T17451.
  
     0.650
MXAN_6819
Hypothetical protein; Identified by Glimmer2; putative.
       0.569
MXAN_6820
Putative lipoprotein.
       0.569
MXAN_0569
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.559
MXAN_1123
Putative S-adenosyl-L-methionine: L-methionine S-methyltransferase; Identified by similarity to GB:AAD49573.1; match to protein family HMM PF00155.
  
    0.556
MXAN_6543
Identified by match to protein family HMM PF00149.
  
     0.554
MXAN_7421
Chain length determinant family protein; Identified by match to protein family HMM PF02706.
  
     0.553
MXAN_5485
Conserved hypothetical protein; Identified by similarity to PIR:F69459.
  
     0.540
MXAN_7423
Conserved hypothetical protein.
  
     0.522
MXAN_2366
Putative lipoprotein.
  
     0.519
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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