STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6825Conserved hypothetical protein; Identified by similarity to GB:AAQ58200.1. (355 aa)    
Predicted Functional Partners:
pfkB
6-phosphofructokinase; Identified by similarity to SP:P06999; match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.594
MXAN_5522
Lactonizing lipase; Identified by similarity to SP:P26876; match to protein family HMM PF00561.
  
    0.591
MXAN_1436
Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
  
     0.541
MXAN_0869
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.534
lipB-2
Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
  
    0.530
MXAN_0470
Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
  
     0.499
MXAN_6790
Conserved hypothetical protein.
  
    0.496
MXAN_6826
Putative sodium ABC transporter, permease protein; Identified by similarity to GB:BAC87992.1.
       0.496
natA
Sodium ABC tranporter ATP-binding protein NatA; Identified by similarity to SP:P46903; match to protein family HMM PF00005.
       0.496
MXAN_6828
Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
     
 0.483
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.