STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_6861Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. (162 aa)    
Predicted Functional Partners:
MXAN_6862
MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.
  
 
 0.791
aglS
Adventurous gliding motility protein AglS; Identified by similarity to GB:AAO22897.1.
  
    0.761
MXAN_6845
TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01352.
  
 
 0.703
MXAN_3003
MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.
  
 
 0.555
MXAN_0275
tonB system transport protein ExbB/TolQ; Identified by similarity to SP:P18783; match to protein family HMM PF01618.
  
 
 0.535
MXAN_0818
MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.
  
 
 0.535
MXAN_1448
Transporter, MotA/TolQ/ExbB proton channel family; Identified by match to protein family HMM PF01618.
  
 
 0.535
MXAN_4669
MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.
  
 
 0.535
MXAN_5753
Transporter, MotA/TolQ/ExbB proton channel family; Identified by similarity to SP:P05828; match to protein family HMM PF01618.
  
 
 0.535
MXAN_6483
MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.
  
 
 0.535
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.