STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_7115ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (557 aa)    
Predicted Functional Partners:
MXAN_7114
ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF01547.
 
 
 0.995
MXAN_0770
Iron ABC transporter, periplasmic iron-binding protein; Identified by similarity to SP:P17940; match to protein family HMM PF01547.
 
 0.981
MXAN_0772
Iron ABC transporter, ATP-binding protein; Identified by similarity to GB:AAS81608.1; match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
 
 0.969
MXAN_0995
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
 
 0.967
MXAN_0771
Iron ABC transporter, permease protein; Identified by similarity to SP:P21409; match to protein family HMM PF00528.
  
  
 
0.928
MXAN_5847
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.670
modC
Molybdate ABC transporter, ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
 
     0.611
MXAN_6569
Ferrichrome ABC transporter, ATP-binding protein; Identified by similarity to SP:P07821; match to protein family HMM PF00005.
   
  
 0.567
MXAN_5377
Putative sugar ABC transporter, ATP-binding protein; Identified by similarity to GB:AAC04471.1; match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
   
 0.535
MXAN_6576
Identified by match to protein family HMM PF01497.
   
  
 0.506
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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