STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_7194Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (334 aa)    
Predicted Functional Partners:
MXAN_3020
Conserved hypothetical protein; Identified by similarity to GB:BAC13022.1; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
 
    
 0.901
MXAN_3461
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF00550.
 
 
 0.767
MXAN_6398
Putative 3-oxoacyl-acyl carrier protein reductase; Identified by similarity to SP:P25716; match to protein family HMM PF00106.
  
 
   0.767
MXAN_4370
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
  
 
   0.756
MXAN_0211
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.
  
 
   0.679
MXAN_0499
Hypothetical protein; Identified by Glimmer2; putative.
  
 
   0.605
MXAN_7193
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.592
MXAN_4305
Amino acid adenyltransferase; Identified by match to protein family HMM PF00501; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.
      0.540
MXAN_3981
Conserved hypothetical protein.
 
  
   0.513
MXAN_0807
Conserved hypothetical protein; Identified by similarity to PIR:B95852.
  
     0.471
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.