STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_7217Hypothetical protein; Identified by Glimmer2; putative. (646 aa)    
Predicted Functional Partners:
MXAN_7214
RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.783
MXAN_7215
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MXAN_7216
ICE-like protease (caspase) p20 domain protein; Identified by match to protein family HMM PF00656.
       0.773
MXAN_7213
Di-haem cytochrome-c peroxidase; Identified by match to protein family HMM PF03150.
       0.572
MXAN_7219
Hypothetical protein; Identified by Glimmer2; putative.
  
   
0.541
sugE
Quaternary ammonium compound-resistance protein SugE; Identified by similarity to SP:P30743; match to protein family HMM PF00893.
      
 0.510
MXAN_0383
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.481
MXAN_1234
Identified by similarity to SP:P54738; match to protein family HMM PF00069.
      
 0.441
MXAN_2399
Serine/threonine-protein kinase; Identified by match to protein family HMM PF00069.
      
 0.441
MXAN_4198
Putative outer membrane macrolide efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
      
 0.441
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.