STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXAN_7280Putative CRISPR-associated protein Crm3. (401 aa)    
Predicted Functional Partners:
crm2
CRISPR-associated protein Crm2; Identified by match to protein family HMM TIGR01872; match to protein family HMM TIGR02577.
 
 
 
 0.993
cmr1
CRISPR-associated RAMP protein Cmr1; Identified by match to protein family HMM PF03787; match to protein family HMM TIGR01894.
 
 
   0.965
cmr4
CRISPR-associated RAMP protein Cmr4; Identified by match to protein family HMM PF03787; match to protein family HMM TIGR01867; match to protein family HMM TIGR02580.
 
   
 0.964
cmr6
CRISPR-associated RAMP protein Cmr6; Identified by match to protein family HMM PF03787; match to protein family HMM TIGR01898.
 
   
 0.963
MXAN_7283
Putative CRISPR-associated protein.
   
   0.850
cmr5
CRISPR-associated protein Cmr5; Identified by match to protein family HMM TIGR01881.
     
 0.842
MXAN_7276
CRISPR-associated protein, Cas6-related; Identified by similarity to GB:AAN50387.1; match to protein family HMM TIGR02807.
 
     0.841
MXAN_7284
Conserved hypothetical protein.
       0.782
MXAN_7285
Identified by match to protein family HMM PF00899.
       0.782
MXAN_7286
Hypothetical protein; Identified by Glimmer2; putative.
       0.686
Your Current Organism:
Myxococcus xanthus
NCBI taxonomy Id: 246197
Other names: M. xanthus DK 1622, Myxococcus xanthus DK 1622
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.