CUS_4579 protein (Ruminococcus albus 8) - STRING interaction network

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Score

CUS_4579

Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative. (121 aa)

Predicted Functional Partners:

CUS_6008

0.924

CUS_4578

0.686

CUS_5603

0.587

CUS_5043

0.576

CUS_7882

0.553

CUS_5194

0.534

CUS_8108

0.529

CUS_6275

0.494

CUS_5429

0.472

CUS_7228

0.466

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CUS_4578	CUS_4579	Hypothetical protein.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	0.686
CUS_4579	CUS_4578	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Hypothetical protein.	0.686
CUS_4579	CUS_5043	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Conserved domain protein.	0.576
CUS_4579	CUS_5194	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	0.534
CUS_4579	CUS_5429	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	FMN-binding domain protein; Identified by match to protein family HMM PF00041; match to protein family HMM PF04205; match to protein family HMM PF07581.	0.472
CUS_4579	CUS_5603	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.587
CUS_4579	CUS_6008	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Hypothetical protein.	0.924
CUS_4579	CUS_6275	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	FMN-binding domain protein; Identified by match to protein family HMM PF04205.	0.494
CUS_4579	CUS_7228	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	0.466
CUS_4579	CUS_7882	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02228.	0.553
CUS_4579	CUS_8108	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.529
CUS_5043	CUS_4579	Conserved domain protein.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	0.576
CUS_5043	CUS_5194	Conserved domain protein.	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	0.437
CUS_5043	CUS_5429	Conserved domain protein.	FMN-binding domain protein; Identified by match to protein family HMM PF00041; match to protein family HMM PF04205; match to protein family HMM PF07581.	0.644
CUS_5043	CUS_5603	Conserved domain protein.	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.569
CUS_5043	CUS_6008	Conserved domain protein.	Hypothetical protein.	0.490
CUS_5043	CUS_7228	Conserved domain protein.	ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.	0.405
CUS_5043	CUS_7882	Conserved domain protein.	Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02228.	0.650
CUS_5043	CUS_8108	Conserved domain protein.	Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.506
CUS_5194	CUS_4579	Relaxase/mobilization nuclease domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03432.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	0.534