Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CUS_4598 | CUS_4599 | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF08282. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.758 |
CUS_4599 | CUS_4598 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF08282. | 0.758 |
CUS_4599 | CUS_5645 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801. | 0.887 |
CUS_4599 | CUS_5646 | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | AMP-binding enzyme; Identified by match to protein family HMM PF00106; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF08659. | 0.782 |
CUS_5645 | CUS_4599 | Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.887 |
CUS_5645 | CUS_5646 | Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801. | AMP-binding enzyme; Identified by match to protein family HMM PF00106; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF08659. | 0.999 |
CUS_5646 | CUS_4599 | AMP-binding enzyme; Identified by match to protein family HMM PF00106; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF08659. | Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. | 0.782 |
CUS_5646 | CUS_5645 | AMP-binding enzyme; Identified by match to protein family HMM PF00106; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF08659. | Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801. | 0.999 |