hup protein (Ruminococcus albus 8) - STRING interaction network

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[Homology]

Score

hup

DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. (110 aa)

Predicted Functional Partners:

rplS

0.631

rpsT

0.624

CUS_7361

0.534

rpsO

0.493

polA

0.473

CUS_4843

0.400

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_4843	hup	CUS_4843	CUS_4841	Dockerin type I repeat protein; Identified by match to protein family HMM PF00404.	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	0.400
CUS_7361	hup	CUS_7361	CUS_4841	Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01817.	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	0.534
CUS_7361	rplS	CUS_7361	CUS_7793	Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01817.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.593
CUS_7361	rpsO	CUS_7361	CUS_7481	Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01817.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.674
hup	CUS_4843	CUS_4841	CUS_4843	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	Dockerin type I repeat protein; Identified by match to protein family HMM PF00404.	0.400
hup	CUS_7361	CUS_4841	CUS_7361	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01817.	0.534
hup	polA	CUS_4841	CUS_6380	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.473
hup	rplS	CUS_4841	CUS_7793	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.631
hup	rpsO	CUS_4841	CUS_7481	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.493
hup	rpsT	CUS_4841	CUS_5690	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.624
polA	hup	CUS_6380	CUS_4841	DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	0.473
polA	rpsO	CUS_6380	CUS_7481	DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.447
rplS	CUS_7361	CUS_7793	CUS_7361	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01817.	0.593
rplS	hup	CUS_7793	CUS_4841	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	0.631
rplS	rpsO	CUS_7793	CUS_7481	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.990
rplS	rpsT	CUS_7793	CUS_5690	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.977
rpsO	CUS_7361	CUS_7481	CUS_7361	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01817.	0.674
rpsO	hup	CUS_7481	CUS_4841	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	DNA-binding protein HU; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.	0.493
rpsO	polA	CUS_7481	CUS_6380	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.447
rpsO	rplS	CUS_7481	CUS_7793	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.990