scfA protein (Ruminococcus albus 8) - STRING interaction network

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Score

scfA

rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973. (47 aa)

Predicted Functional Partners:

scfB

0.989

CUS_4344

0.942

CUS_4902

0.541

CUS_6001

0.521

yajC

0.519

CUS_4905

0.464

CUS_4906

0.464

Your Current Organism:

Ruminococcus albus 8

NCBI taxonomy Id: 246199
Other names: R. albus 8, Ruminococcus albus str. 8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUS_4344	scfA	CUS_4344	CUS_4903	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	0.942
CUS_4902	scfA	CUS_4902	CUS_4903	Hypothetical protein; Identified by glimmer; putative.	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	0.541
CUS_4902	yajC	CUS_4902	CUS_4901	Hypothetical protein; Identified by glimmer; putative.	Preprotein translocase, YajC subunit; Identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739.	0.576
CUS_4905	CUS_4906	CUS_4905	CUS_4906	Conserved domain protein; Overlaps another CDS with the same product name.	Conserved domain protein; Overlaps another CDS with the same product name.	0.773
CUS_4905	scfA	CUS_4905	CUS_4903	Conserved domain protein; Overlaps another CDS with the same product name.	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	0.464
CUS_4905	scfB	CUS_4905	CUS_4904	Conserved domain protein; Overlaps another CDS with the same product name.	six-Cys-in-45 modification radical SAM protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03974.	0.773
CUS_4906	CUS_4905	CUS_4906	CUS_4905	Conserved domain protein; Overlaps another CDS with the same product name.	Conserved domain protein; Overlaps another CDS with the same product name.	0.773
CUS_4906	scfA	CUS_4906	CUS_4903	Conserved domain protein; Overlaps another CDS with the same product name.	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	0.464
CUS_4906	scfB	CUS_4906	CUS_4904	Conserved domain protein; Overlaps another CDS with the same product name.	six-Cys-in-45 modification radical SAM protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03974.	0.773
CUS_6001	scfA	CUS_6001	CUS_4903	Hydrid cluster protein-associated redox disulfide domain protein; Identified by match to protein family HMM TIGR03980.	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	0.521
CUS_6001	scfB	CUS_6001	CUS_4904	Hydrid cluster protein-associated redox disulfide domain protein; Identified by match to protein family HMM TIGR03980.	six-Cys-in-45 modification radical SAM protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03974.	0.417
scfA	CUS_4344	CUS_4903	CUS_4344	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.942
scfA	CUS_4902	CUS_4903	CUS_4902	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	Hypothetical protein; Identified by glimmer; putative.	0.541
scfA	CUS_4905	CUS_4903	CUS_4905	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	Conserved domain protein; Overlaps another CDS with the same product name.	0.464
scfA	CUS_4906	CUS_4903	CUS_4906	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	Conserved domain protein; Overlaps another CDS with the same product name.	0.464
scfA	CUS_6001	CUS_4903	CUS_6001	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	Hydrid cluster protein-associated redox disulfide domain protein; Identified by match to protein family HMM TIGR03980.	0.521
scfA	scfB	CUS_4903	CUS_4904	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	six-Cys-in-45 modification radical SAM protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03974.	0.989
scfA	yajC	CUS_4903	CUS_4901	rSAM-modified six-cysteine peptide SCIFF; Identified by match to protein family HMM TIGR03973.	Preprotein translocase, YajC subunit; Identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739.	0.519
scfB	CUS_4905	CUS_4904	CUS_4905	six-Cys-in-45 modification radical SAM protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03974.	Conserved domain protein; Overlaps another CDS with the same product name.	0.773
scfB	CUS_4906	CUS_4904	CUS_4906	six-Cys-in-45 modification radical SAM protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03974.	Conserved domain protein; Overlaps another CDS with the same product name.	0.773